architecture¶

Define a set of models to be used within tiatoolbox.

Functions

fetch_pretrained_weights

Get the pretrained model information from yml file.

get_pretrained_model

Load a predefined PyTorch model with the appropriate pretrained weights.

grandqc

GrandQC Tissue Detection Model Architecture [1].

hovernet

Define HoVerNet architecture.

hovernetplus

Define HoVerNetPlus architecture.

idars

Define CNNs as used in IDaRS for prediction of molecular pathways and mutations.

kongnet

KongNet Nuclei Detection Model Architecture [1].

mapde

Define MapDe architecture.

micronet

Define MicroNet architecture.

nuclick

Define original NuClick architecture.

sccnn

Define SCCNN architecture.

timm_efficientnet

EfficientNet Encoder Implementation using timm.

unet

Define a set of UNet variants to be used within tiatoolbox.

utils

Define utility layers and operators for models in tiatoolbox.

vanilla

Define vanilla CNNs with torch backbones, mainly for patch classification.